<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Clinical Neuroscience | Laurent Perrinet</title><link>https://laurentperrinet.github.io/category/clinical-neuroscience/</link><atom:link href="https://laurentperrinet.github.io/category/clinical-neuroscience/index.xml" rel="self" type="application/rss+xml"/><description>Clinical Neuroscience</description><generator>Hugo Blox Builder (https://hugoblox.com)</generator><language>en</language><copyright>This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All persons copying this information are expected to adhere to the terms and constraints invoked by each author's copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder. This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License Please note that multiple distribution, publication or commercial usage of copyrighted papers included in this website would require submission of a permission request addressed to the journal in which the paper appeared.</copyright><lastBuildDate>Fri, 01 Jan 2016 00:00:00 +0000</lastBuildDate><image><url>https://laurentperrinet.github.io/media/icon_hu_f2990a9a83ba401.png</url><title>Clinical Neuroscience</title><link>https://laurentperrinet.github.io/category/clinical-neuroscience/</link></image><item><title>Rick A Adams</title><link>https://laurentperrinet.github.io/author/rick-a-adams/</link><pubDate>Fri, 01 Jan 2016 00:00:00 +0000</pubDate><guid>https://laurentperrinet.github.io/author/rick-a-adams/</guid><description>&lt;h2 id="collaborative-publications"&gt;Collaborative publications&lt;/h2&gt;
&lt;p&gt;I had the chance to visit the theoretical group of Karl Friston at the Wellcome Trust Centre for Neuroimaging (University College London) from November 2010 to February 2012. During this period we built a series of active‑inference models of eye‑movement control. First, we introduced a generative model of saccadic behaviour &lt;a href="https://laurentperrinet.github.io/publication/friston-12/"&gt;Friston &lt;em&gt;et al.&lt;/em&gt;, 2012&lt;/a&gt;. We then extended the framework to clinical populations, demonstrating that neuromodulation may critically shape model predictions in participants with and without schizophrenia (&lt;a href="https://laurentperrinet.github.io/publication/adams-12/"&gt;Adams &lt;em&gt;et al.&lt;/em&gt;, 2012&lt;/a&gt;). Finally, we incorporated realistic sensory‑motor transmission delays, providing a more accurate account of the timing of perception‑action cycles &lt;a href="https://laurentperrinet.github.io/publication/perrinet-adams-friston-14/"&gt;Perrinet &lt;em&gt;et al.&lt;/em&gt;, 2014&lt;/a&gt;.&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;modelling eye movements using active inference
&lt;div class="pub-list-item view-citation" style="margin-bottom: 1rem"&gt;
&lt;i class="far fa-file-alt pub-icon" aria-hidden="true"&gt;&lt;/i&gt;
&lt;span class="article-metadata li-cite-author"&gt;
&lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/karl-friston/"&gt;Karl Friston&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/rick-a-adams/"&gt;Rick A Adams&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/laurent-u-perrinet/"&gt;Laurent U Perrinet&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/michael-breakspear/"&gt;Michael Breakspear&lt;/a&gt;&lt;/span&gt;
&lt;/span&gt;
(2012).
&lt;a href="https://laurentperrinet.github.io/publication/friston-12/"&gt;Perceptions as Hypotheses: Saccades as Experiments&lt;/a&gt;.
&lt;em&gt;Frontiers in Psychology&lt;/em&gt;.
&lt;p&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://laurentperrinet.github.io/publication/friston-12/friston-12.pdf" target="_blank" rel="noopener"&gt;
PDF
&lt;/a&gt;
&lt;a href="#" class="btn btn-outline-primary btn-page-header btn-sm js-cite-modal"
data-filename="/publication/friston-12/cite.bib"&gt;
Cite
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://doi.org/10.3389/fpsyg.2012.00151" target="_blank" rel="noopener"&gt;
DOI
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://doi.org/10.3389/fpsyg.2012.00151" target="_blank" rel="noopener"&gt;
URL&lt;/a&gt;
&lt;/p&gt;
&lt;/div&gt;
&lt;/li&gt;
&lt;li&gt;applying the model to individuals with and without schizophrenia and demonstrating the role of neuromodulation in eye‑movement contro
&lt;div class="pub-list-item view-citation" style="margin-bottom: 1rem"&gt;
&lt;i class="far fa-file-alt pub-icon" aria-hidden="true"&gt;&lt;/i&gt;
&lt;span class="article-metadata li-cite-author"&gt;
&lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/rick-a-adams/"&gt;Rick A Adams&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/laurent-u-perrinet/"&gt;Laurent U Perrinet&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/karl-friston/"&gt;Karl Friston&lt;/a&gt;&lt;/span&gt;
&lt;/span&gt;
(2012).
&lt;a href="https://laurentperrinet.github.io/publication/adams-12/"&gt;Smooth Pursuit and Visual Occlusion: Active Inference and Oculomotor Control in Schizophrenia&lt;/a&gt;.
&lt;em&gt;PLoS ONE&lt;/em&gt;.
&lt;p&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://laurentperrinet.github.io/publication/adams-12/adams-12.pdf" target="_blank" rel="noopener"&gt;
PDF
&lt;/a&gt;
&lt;a href="#" class="btn btn-outline-primary btn-page-header btn-sm js-cite-modal"
data-filename="/publication/adams-12/cite.bib"&gt;
Cite
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://doi.org/10.1371/journal.pone.0047502" target="_blank" rel="noopener"&gt;
DOI
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://doi.org/10.1371/journal.pone.0047502" target="_blank" rel="noopener"&gt;
URL&lt;/a&gt;
&lt;/p&gt;
&lt;/div&gt;
&lt;/li&gt;
&lt;li&gt;extending the framework to incorporate sensory‑motor delays
&lt;div class="pub-list-item view-citation" style="margin-bottom: 1rem"&gt;
&lt;i class="far fa-file-alt pub-icon" aria-hidden="true"&gt;&lt;/i&gt;
&lt;span class="article-metadata li-cite-author"&gt;
&lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/laurent-u-perrinet/"&gt;Laurent U Perrinet&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/rick-a-adams/"&gt;Rick A Adams&lt;/a&gt;&lt;/span&gt;, &lt;span &gt;
&lt;a href="https://laurentperrinet.github.io/author/karl-friston/"&gt;Karl Friston&lt;/a&gt;&lt;/span&gt;
&lt;/span&gt;
(2014).
&lt;a href="https://laurentperrinet.github.io/publication/perrinet-adams-friston-14/"&gt;Active inference, eye movements and oculomotor delays&lt;/a&gt;.
&lt;em&gt;Biological Cybernetics&lt;/em&gt;.
&lt;p&gt;
&lt;a href="#" class="btn btn-outline-primary btn-page-header btn-sm js-cite-modal"
data-filename="/publication/perrinet-adams-friston-14/cite.bib"&gt;
Cite
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://doi.org/10.1007/s00422-014-0620-8" target="_blank" rel="noopener"&gt;
DOI
&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://link.springer.com/article/10.1007%2Fs00422-014-0620-8" target="_blank" rel="noopener"&gt;
URL&lt;/a&gt;
&lt;a class="btn btn-outline-primary btn-page-header btn-sm" href="https://arxiv.org/abs/1610.05564" target="_blank" rel="noopener"&gt;
arXiv&lt;/a&gt;
&lt;/p&gt;
&lt;/div&gt;
&lt;/li&gt;
&lt;/ul&gt;
&lt;figure id="figure-this-schematic-shows-the-dependencies-among-various-quantities-that-are-assumed-when-modeling-the-exchanges-of-a-self-organizing-system-like-the-brain-with-the-environment-the-top-panel-describes-the-states-of-the-environment-and-the-system-or-agent-in-terms-of-a-probabilistic-dependency-graph-where-connections-denote-directed-dependencies-the-quantities-are-described-within-the-nodes-of-this-graph-with-exemplar-forms-for-their-dependencies-on-other-variables-see-main-text-here-hidden-and-internal-states-are-separated-by-action-and-sensory-states-both-action-and-internal-states-encoding-a-conditional-density-minimize-free-energy-while-internal-states-encoding-prior-beliefs-maximize-salience-both-free-energy-and-salience-are-defined-in-terms-of-a-generative-model-that-is-shown-as-fictive-dependency-graph-in-the-lower-panel-note-that-the-variables-in-the-real-world-and-the-form-of-their-dynamics-are-different-from-that-assumed-by-the-generative-model-this-is-why-external-states-are-in-bold-furthermore-note-that-action-is-a-state-in-the-model-of-the-brain-but-is-replaced-by-hidden-controls-in-the-brains-model-of-its-world-this-means-that-the-agent-is-not-aware-of-action-but-has-beliefs-about-hidden-causes-in-the-world-that-action-can-fulfill-through-minimizing-free-energy-these-beliefs-correspond-to-prior-expectations-that-sensory-states-will-be-sampled-in-a-way-that-optimizes-conditional-confidence-or-salience"&gt;
&lt;div class="d-flex justify-content-center"&gt;
&lt;div class="w-100" &gt;&lt;img src="https://www.frontiersin.org/files/Articles/21922/fpsyg-03-00151-r4/image_m/fpsyg-03-00151-g001.jpg" alt="**This schematic shows the dependencies among various quantities that are assumed when modeling the exchanges of a self organizing system like the brain with the environment.** The top panel describes the states of the environment and the system or agent in terms of a probabilistic dependency graph, where connections denote directed dependencies. The quantities are described within the nodes of this graph with exemplar forms for their dependencies on other variables (see main text). Here, hidden and internal states are separated by action and sensory states. Both action and internal states encoding a conditional density minimize free energy, while internal states encoding prior beliefs maximize salience. Both free energy and salience are defined in terms of a generative model that is shown as fictive dependency graph in the lower panel. Note that the variables in the real world and the form of their dynamics are different from that assumed by the generative model; this is why external states are in bold. Furthermore, note that action is a state in the model of the brain but is replaced by hidden controls in the brain’s model of its world. This means that the agent is not aware of action but has beliefs about hidden causes in the world that action can fulfill through minimizing free energy. These beliefs correspond to prior expectations that sensory states will be sampled in a way that optimizes conditional confidence or salience." loading="lazy" data-zoomable /&gt;&lt;/div&gt;
&lt;/div&gt;&lt;figcaption&gt;
&lt;strong&gt;This schematic shows the dependencies among various quantities that are assumed when modeling the exchanges of a self organizing system like the brain with the environment.&lt;/strong&gt; The top panel describes the states of the environment and the system or agent in terms of a probabilistic dependency graph, where connections denote directed dependencies. The quantities are described within the nodes of this graph with exemplar forms for their dependencies on other variables (see main text). Here, hidden and internal states are separated by action and sensory states. Both action and internal states encoding a conditional density minimize free energy, while internal states encoding prior beliefs maximize salience. Both free energy and salience are defined in terms of a generative model that is shown as fictive dependency graph in the lower panel. Note that the variables in the real world and the form of their dynamics are different from that assumed by the generative model; this is why external states are in bold. Furthermore, note that action is a state in the model of the brain but is replaced by hidden controls in the brain’s model of its world. This means that the agent is not aware of action but has beliefs about hidden causes in the world that action can fulfill through minimizing free energy. These beliefs correspond to prior expectations that sensory states will be sampled in a way that optimizes conditional confidence or salience.
&lt;/figcaption&gt;&lt;/figure&gt;</description></item><item><title>Smooth Pursuit and Visual Occlusion: Active Inference and Oculomotor Control in Schizophrenia</title><link>https://laurentperrinet.github.io/publication/adams-12/</link><pubDate>Fri, 26 Oct 2012 00:00:00 +0000</pubDate><guid>https://laurentperrinet.github.io/publication/adams-12/</guid><description>&lt;p&gt;
&lt;figure &gt;
&lt;div class="d-flex justify-content-center"&gt;
&lt;div class="w-100" &gt;&lt;img alt="header" srcset="
/publication/adams-12/adams-12_hu_3f8a973274e0c37.webp 400w,
/publication/adams-12/adams-12_hu_9164dbc7bbb14be1.webp 760w,
/publication/adams-12/adams-12_hu_3cbc57e3b05f8776.webp 1200w"
src="https://laurentperrinet.github.io/publication/adams-12/adams-12_hu_3f8a973274e0c37.webp"
width="760"
height="188"
loading="lazy" data-zoomable /&gt;&lt;/div&gt;
&lt;/div&gt;&lt;/figure&gt;
&lt;/p&gt;</description></item><item><title>Kevin Mairot</title><link>https://laurentperrinet.github.io/author/kevin-mairot/</link><pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate><guid>https://laurentperrinet.github.io/author/kevin-mairot/</guid><description>&lt;h1 id="phd-student-2023-10--2027-09-lintelligence-artificielle-comme-aide-au-diagnostic-des-dystrophies-rétiniennes"&gt;PhD Student (2023-10 / 2027-09): L&amp;rsquo;intelligence artificielle comme aide au diagnostic des dystrophies rétiniennes&lt;/h1&gt;
&lt;ul&gt;
&lt;li&gt;Institut des Neurosciences de la Timone, Aix-Marseille Université / CNRS&lt;/li&gt;
&lt;li&gt;Thesis co-direction: &lt;a href="https://laurentperrinet.github.io/author/laurent-u-perrinet/" target="_blank" rel="noopener"&gt;Laurent Perrinet (principal supervisor)&lt;/a&gt; and &lt;a href="https://www.linkedin.com/in/fr%C3%A9d%C3%A9ric-matonti-86952082/?originalSubdomain=fr" target="_blank" rel="noopener"&gt;Frédéric Matonti (ophtalmologue, Marseille)&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description></item></channel></rss>